In the first paragraph of the experimental section, the
paper says:
I suspect that the noise level and baseline location for
spectra collected with different aperture sizes would be
quite different. A simple difference of spectra seems
likely to introduce many artifacts. Indeed, the authors
themselves do not appear to employ this simplistic approach
alone in locating concentrations in layers in their actual
data (multiplicative scatter correction, or MSC, for
example, is mentioned in the Data Preprocessing and Analysis
section). Perhaps the manuscript should provide some sort
of warning at this point in the text that the subtraction
approach, while a useful model for describing the concept,
may be too simple for reliable analytical use in biological
imaging.
I would like to see a detailed diagram of a Franz cell, or a
literature reference to the Franz cell.
In the section entitled Calibration with An Artificial
Neural Network (ANN) the text says:
In the following section,
One comment on style: I still prefer the use of
quantification (which is found in my Webster s Unabridged
Dictionary) to quantitation (which is not).
by Robert A. Lodder, Ph.D.
Lodder@pop.uky.edu
Larger apertures tend to allow light that is diffusely
reflected from all layers of the sample (including the
surface and subsurface layers) to reach the detectors. In
contrast, smaller apertures allow primarily that light
reflected from more shallow surface layers to reach the
detectors. Thus a difference spectrum (spectrum collected
with larger aperture - spectrum collected with smaller
aperture) provides a spectrum of the deeper layers of the
sample. By using a series of apertures, and calculating the
appropriate difference spectra, depth-resolved spectra may
be selectively collected from various layers of the sample.
Calibration with the ANN yielded an R-squared of 0.935 with
a standard error of 66 g/ml for the training group and a
standard error of 123 for the test group, proving the ANN
was reasonably effective for prediction of salicylic acid
concentration at any time and any depth in this experiment.
The variances of the calibration and prediction samples were
not significantly different in an F test (p < 0.05).
It would be useful to reiterate the number of samples used
in the F test here because the variances look rather
different (one is almost double the other).
Equation 9 was used in conjunction with a nonlinear
modeling program (TableCurve 3D, Jandel Scientific, Inc.,
San Rafael, CA) to estimate all of the parameters (, A, B
and D). Using this equation relating the concentration to
time and distance, the diffusion coefficient of SA in an
agarose matrix was determined to be 25.7 x 10 cm/sec.
Coefficients , A, and B are 1.41 x 10 sec, 1524.2 and
1575.1 respectively. The correlation coefficient for the
nonlinear regression equation was estimated to be 0.9641.
At the 95% confidence level, the model shown in Eq (9) was
statistically significant (p < 0.05). A surface fit of Eq.
(9) to the actual data is seen in Figure 12, which displays
correlation of the model to the data.
Was the hypothesis tested statistically (at p < 0.05) the
hypothesis that rho=0 or that the ratio of variances was
one?
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